One Line:

ls -r *.cs | % {(gc $_ | % { $_.TrimEnd() }) | sc $_ }

Multiple Lines (same command):

Get-ChildItem -Recurse *.cs |
    ForEach-Object
    {
        (Get-Content $_ | ForEach-Object { $_.TrimEnd() }) |
        Set-Content $_
    }

Note that we're filtering for files with a *.cs extension. To include all files, remove that filter.

See also: